jeffhussmann / knock-knock

toolkit for analyzing genome editing experiments
GNU General Public License v3.0
20 stars 10 forks source link

Missing 1 required positional argument: `stages` #9

Closed hukai916 closed 1 year ago

hukai916 commented 1 year ago

Hi Jeff,

When running the knock-knock process command, I encountered the following error:

Traceback (most recent call last):
  File "/opt/conda/bin/knock-knock", line 236, in <module>
    args.func(args)
TypeError: process() missing 1 required positional argument: 'stages'

Also, in your example, it says:

knock-knock process PROJECT_DIR EXAMPLE_GROUP EXAMPLE_SAMPLE

What does EXAMPLE_SAMPLE mean? Can you provide some concrete example?

Thanks and best,

--Kai

jeffhussmann commented 1 year ago

Consolidating discussion in https://github.com/jeffhussmann/knock-knock/issues/12.