Choosing read length for Oxford Nanopore long reads

jenniferlu717 / Bracken

Bracken (Bayesian Reestimation of Abundance with KrakEN) is a highly accurate statistical method that computes the abundance of species in DNA sequences from a metagenomics sample.

http://ccb.jhu.edu/software/bracken/index.shtml

GNU General Public License v3.0

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Choosing read length for Oxford Nanopore long reads #240

Open andreyeremin opened 8 months ago

andreyeremin commented 8 months ago

Please, explain what read length should I use when running bracken on long read sequencing data

CaroleBelliardo commented 4 days ago

Same question for Hifi Pacbio Long-reads