jerdra / SDC-BIDS-fMRI_old

Scientific-Compute Working Group Workshop on performing analysis of neuroimaging data in python

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Closed josephmje closed 5 years ago

josephmje commented 5 years ago

Better explanation of NiftisLabelMasker is needed!

[x] Exercises should be done for confound set-up to reinforce what they've learned previously. Possibly with fill in the blanks?

[x] This last exercise with computing the outputs should be done as a fill in the blank if possible. With a lot of guidance in filling out the array we're collecting.

This section needs a bit of work on clarity.

jerdra commented 5 years ago

think we should move straight to NiftisLabelsMasker instead of manually computing? Or is that hiding too much about what we're actually doing?

For simplicity i wanna remove the initial section, for understanding I wanna keep it :speak_no_evil:

jerdra commented 5 years ago

Update: will keep manual computation but skip to NiftisLabelMasker if constrained on time

jerdra commented 5 years ago

29 contains updates for:

Explaining connectivity matrix as correlations
Implementing signal cleaning exercise + NiftiLabelsMasker fill in the blanks exercise

Still need to finish up the last visualization component

jerdra commented 5 years ago

Finished updating 07, might touch up tmrw depending on time