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jeromekelleher / sc2ts

Infer a succinct tree sequence from SARS-COV-2 variation data
MIT License
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Sample QC metadata #133

Open szhan opened 1 year ago

szhan commented 1 year ago

We should keep track of sample QC in the metadata to help diagnose issues in the ARGs, for example, pre-imputed bases in some samples as discussed in #100.

jeromekelleher commented 1 year ago

There's some in there already, can you paste an example in here, so we can discuss what additional info you'd like to add?

jeromekelleher commented 1 year ago

Just pick an arbitrary sample an paste in its metadata