Since we don't really use GISAID sequences at the moment, this snippet in utils.py when creating a TreeInfo object is not needed anymore, and shouldn't be required in the metadata.
self.epi_isl_map[md["gisaid_epi_isl"]] = node.id
if md["gisaid_epi_isl"] is not None:
if "." in md["gisaid_epi_isl"]:
self.epi_isl_map[md["gisaid_epi_isl"].split(".")[0]] = node.id
Since we don't really use GISAID sequences at the moment, this snippet in
utils.py
when creating a TreeInfo object is not needed anymore, and shouldn't be required in the metadata.