This sample is being placed on much too short a branch, which would seem to be a result of a chain of reversions. It would be worth unpicking this to see how these reversions got in (i.e., were they place by parsimony during tree building, and if so, would a better tree building alg have done a better job?)
This sample is being placed on much too short a branch, which would seem to be a result of a chain of reversions. It would be worth unpicking this to see how these reversions got in (i.e., were they place by parsimony during tree building, and if so, would a better tree building alg have done a better job?)