How can I create my own processor?

jerryji1993 / DNABERT

DNABERT: pre-trained Bidirectional Encoder Representations from Transformers model for DNA-language in genome

https://doi.org/10.1093/bioinformatics/btab083

Apache License 2.0

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How can I create my own processor? #101

Open dominiclopez391 opened 1 year ago

dominiclopez391 commented 1 year ago

Hello,

I am interested in using DNABERT for a specific multi-class classification task, but neither the given DNA processors nor the GLUE processors fit my intended use case. Is it possible to create my own specific classification task? If not, I may end up fine-tuning the DNAPROM binary-classification task several times, which is not ideal.

nigelhartm commented 1 year ago

Take into account that this issue is similar to jerryji1993/DNABERT#34