How to use `--task_name dnasplice`?

jerryji1993 / DNABERT

DNABERT: pre-trained Bidirectional Encoder Representations from Transformers model for DNA-language in genome

https://doi.org/10.1093/bioinformatics/btab083

Apache License 2.0

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How to use `--task_name dnasplice`? #90

Open ajoudaki opened 1 year ago

ajoudaki commented 1 year ago

Hi! I was trying to figure out how to run the model with the dnasplice task? I couldn't find descriptions of the task in the readme, such as the input data format, as well as the other configuration parameters. Also, is it safe to use the finetuned model that you have provided for this task? (Is this finetuning relevant to splice detection as well? Thanks! Cheers, Amir