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jertubiana / ScanNet

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Problems with retraining #6

Closed c-y-1 closed 1 year ago

c-y-1 commented 1 year ago

Hello, when I run "python train.py" to retrain, this prompt appears. How can I solve it?

Failed to process example 2as0_0-A (3/3194), Error: [Errno 2] No such file or directory: 'MSA/MSA_2as0_0_A_query.fasta'

It would be my pleasure if you could answer it

jertubiana commented 1 year ago

Hi, Thank you for your interest in your research. The error means that you are trying to retrain the model with multiple sequence alignment (MSA) information, but have not installed HH-blits to generate the MSAs Please set the use_evolutionary flag to False (l80), and it should work. Best, Jerome

On 20 Mar 2023, at 16:31, c-y-1 @.***> wrote:

Hello, when I run "python train.py" to retrain, this prompt appears. How can I solve it?

Failed to process example 2as0_0-A (3/3194), Error: [Errno 2] No such file or directory: 'MSA/MSA_2as0_0_A_query.fasta'

It would be my pleasure if you could answer it

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