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jessieren / DeepVirFinder

Identifying viruses from metagenomic data by deep learning
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filelog not imported #22

Open askerdb opened 3 years ago

askerdb commented 3 years ago

The code to show the help crashes with:

dvf.py: ERROR: missing required command-line argument Traceback (most recent call last): File "dvf.py", line 33, in filelog.write(prog_base + ": ERROR: missing required command-line argument") NameError: name 'filelog' is not defined

The filelog is not instantiated anywhere I can see.

jessieren commented 3 years ago

Thanks for reporting that. Could you copy your command here for the purpose of debugging?

askerdb commented 3 years ago

It should work with any command that doesn't include the input argument

(dvf) -bash-4.2$ python dvf.py -o test dvf.py: ERROR: missing required command-line argumentTraceback (most recent call last): File "dvf.py", line 33, in filelog.write(prog_base + ": ERROR: missing required command-line argument") NameError: name 'filelog' is not defined

On Tue, 13 Apr 2021 at 22:18, Jessie Jie Ren @.***> wrote:

Thanks for reporting that. Could you copy your command here for the purpose of debugging?

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zhongshengbin269 commented 2 years ago

hi! I also encountered this when running the code: line 33, in filelog.write(prog_base + ": ERROR: missing required command-line argument") NameError: name 'filelog' is not defined How should excuse me solve?