Hi! I downloaded all the training set used in the paper and concatenated all the virus and prokaryote sequences in two different fasta file of about 76MB and 110GB respectively.
Running the host encoding is taking more than one week... the command used is
python ../encode.py -i ../datasets/training/host-training.fa -l 500 -p host
But the readme says that it should take about 5 minutes. I am doing something wrong?
Thanks
Hi! I downloaded all the training set used in the paper and concatenated all the virus and prokaryote sequences in two different fasta file of about 76MB and 110GB respectively.
Running the host encoding is taking more than one week... the command used is
python ../encode.py -i ../datasets/training/host-training.fa -l 500 -p hostBut the readme says that it should take about 5 minutes. I am doing something wrong? Thanks