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jeya-maria-jose / KiU-Net-pytorch

Official Pytorch Code of KiU-Net for Image/3D Segmentation - MICCAI 2020 (Oral), IEEE TMI
https://sites.google.com/view/kiunet/kiu-net
MIT License
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About the preprocessing data? #24

Closed ee-hash closed 3 years ago

ee-hash commented 3 years ago

Hi! Follow the code, the train data should be png. I want to run the 2D model. But I could not find the code to convert nii to png. The preprocess workflow: First, run LiTs/data_prepare/get_training_set.py; second, convert nii to png. Is it right? And could you share the code(second step) with me? Thank you! QQ图片20210423150341

jeya-maria-jose commented 3 years ago

Hi,

This format is meant for training 2D images. To run the LiTS experiment, please follow these instructions.

ee-hash commented 3 years ago

Hi,

This format is meant for training 2D images. To run the LiTS experiment, please follow these instructions.

Thanks for your reply. The another question is: when wil be the Brain Anatomy US dataset public? I wanna apply kiunet for 2D medical dataset. Thanks!

jeya-maria-jose commented 3 years ago

Hopefully by next month ! Thanks for your interest !