Starts new FASTQ download workflow.

jfear / ncbi_remap

This is the drosSRA project, where we are remapping all Drosophila melanogaster RNA-seq data to FlyBase release 6 and updating annotations.

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Closed jfear closed 4 years ago

jfear commented 4 years ago

Starts a common FASTQ download workflow
Uses prefetch for quicker download
Splits Fastq checking and extraction into separate steps to allow parallel work.