jfq3
commented
2 years ago I have been using R version 4.2.0 because that is the latest version that works with Bioconductor. But to address your question, I removed ggordiplots, updated to R version 4.2.1 and reinstalled ggordiplots without any problems. The dependency glue could not be updated, but that did not matter. So I am afraid I cannot help you except to share my configuration.
version _
platform x86_64-w64-mingw32
arch x86_64
os mingw32
crt ucrt
system x86_64, mingw32
status
major 4
minor 2.1
year 2022
month 06
day 23
svn rev 82513
language R
version.string R version 4.2.1 (2022-06-23 ucrt) nickname Funny-Looking Kid
devtools::install_github("jfq3/ggordiplots", dependencies = TRUE, build_vignettes = TRUE) library(ggordiplots)
sessionInfo() R version 4.2.1 (2022-06-23 ucrt) Platform: x86_64-w64-mingw32/x64 (64-bit) Running under: Windows 10 x64 (build 22000)
Matrix products: default
locale:
[1] LC_COLLATE=English_United States.utf8 LC_CTYPE=English_United States.utf8
[3] LC_MONETARY=English_United States.utf8 LC_NUMERIC=C
[5] LC_TIME=English_United States.utf8
attached base packages: [1] stats graphics grDevices utils datasets methods base
other attached packages:
[1] ggordiplots_0.4.1 glue_1.6.2 vegan_2.6-2 lattice_0.20-45 permute_0.9-7
[6] ggplot2_3.3.6
loaded via a namespace (and not attached):
[1] Rcpp_1.0.9 pillar_1.8.0 compiler_4.2.1 yulab.utils_0.0.5 tools_4.2.1
[6] digest_0.6.29 gtable_0.3.0 jsonlite_1.8.0 evaluate_0.16 tidytree_0.3.9
[11] lifecycle_1.0.1 tibble_3.1.8 nlme_3.1-157 mgcv_1.8-40 pkgconfig_2.0.3
[16] rlang_1.0.4 Matrix_1.4-1 cli_3.3.0 DBI_1.1.3 rstudioapi_0.13
[21] yaml_2.3.5 parallel_4.2.1 xfun_0.31 treeio_1.20.1 fastmap_1.1.0
[26] cluster_2.1.3 withr_2.5.0 dplyr_1.0.9 knitr_1.39 generics_0.1.3
[31] vctrs_0.4.1 grid_4.2.1 tidyselect_1.1.2 R6_2.5.1 fansi_1.0.3
[36] rmarkdown_2.15 purrr_0.3.4 tidyr_1.2.0 magrittr_2.0.3 splines_4.2.1
[41] MASS_7.3-57 scales_1.2.0 htmltools_0.5.3 assertthat_0.2.1 colorspace_2.0-3
[46] ape_5.6-2 utf8_1.2.2 munsell_0.5.0 lazyeval_0.2.2
Danread
Using R 4.2.1 I get the message "Warning: package ‘ggordiplots’ is not available for this version of R". Would it be possible to update ggordiplots to allow it to work with the latest version of R?