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jguhlin / minimap2-rs

Rust bindings to minimap2 library
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open syncmer version of minimap2? #60

Open jianshu93 opened 2 months ago

jianshu93 commented 2 months ago

Dear @jguhlin,

I think there is a open syncmer (not minimzer) as seed (https://github.com/lh3/minimap2/blob/c2f07ff2ac8bdc5c6768e63191e614ea9012bd5d/sketch.c#L145-L192), but not sure whether the rust version provided the interface to use it.

Thanks,

Jianshu

jguhlin commented 2 months ago

It should be possible to pull that version as a submodule and rebuild minimap2-sys and use the low-level bindings to get it. I'll see if I can incorporate it later this week.