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jhawkey / IS_mapper

IS mapping software
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Segmentation fault with later versions of Bedtools #16

Closed jhawkey closed 7 years ago

jhawkey commented 8 years ago

Check Bedtools version 2.25 and up - appears to generate a segmentation fault if one or both of the final bed files is empty at the closestBed step.

Possible solutions - try to catch segmentation error, or specify in documentation what versions of bedtools are appropriate.

jhawkey commented 7 years ago

This fix has now been incorporated into the latest update (v0.1.5)