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jhkorhonen / MOODS

MOODS: Motif Occurrence Detection Suite
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installation MOODS-python-1.9.3 #24

Closed RafaelMViana closed 5 years ago

RafaelMViana commented 5 years ago

Hi,

I want to install MOODS 1.9.3 as python module in order to run the suite HINT I am using python 2.7 and the C++ compiler g++5- version:5.5.0

I follow the github guidelines, and get a problem during installation tar xzvf MOODS-python-1.9.3.tar.gz cd MOODS-python-1.9.3/ sudo python setup.py install

running install running build running build_py running build_ext building 'MOODS._tools' extension x86_64-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-3hk45v/python2.7-2.7.15~rc1=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Icore/ -I/usr/include/python2.7 -c core/tools_wrap.cxx -o build/temp.linux-x86_64-2.7/core/tools_wrap.o -march=native -O3 -fPIC --std=c++11 cc1plus: warning: command line option ‘-Wstrict-prototypes’ is valid for C/ObjC but not for C++ core/tools_wrap.cxx:171:11: fatal error: Python.h: No such file or directory

include 

       ^~~~~~~~~~

compilation terminated. error: command 'x86_64-linux-gnu-gcc' failed with exit status 1

I see that under the core folder there are xxx.h files without python.h

There is a path to build/lib.linux-x86_64-2.7/MOODS/ with some .py files on the other hand, build/temp.linux-x86_64-2.7/core/ is empty

May you point me out what I am doing wrong?

Kind regards

jhkorhonen commented 5 years ago

You probably don't have headers and libraries for python development installed on your system. Install python-dev or similar package from your package manager, depending on your Linux distro.