search

jhsiao999 / ashlar

Workflow template
http://jhsiao999.github.io/ashlar/analysis
Creative Commons Attribution 4.0 International
2 stars 1 forks source link

testit package needs installing #3

Closed stephens999 closed 8 years ago

stephens999 commented 8 years ago

when i type make in the analysis subdir i get an error that testit is not installed. Probably should include a list of packages they need to install in the instructions. (And minimize the number that are required...).

Quitting from lines 60-61 (single-cell-pca.Rmd) Error in library("testit") : there is no package called 'testit'

(Maybe this example can be simplified so that testit is not required?)

jhsiao999 commented 8 years ago

The assert function in testit was originally used in the PCA functions to generate a message in case of an error. I removed from function.R any dependency on testit.