Prevent or remove spaces from manifest for barcode or sample names

jhuapl-bio / Basestack

Basestack is a platform for rapid and real time analysis of NGS data. It provides a executable application that connects standard bionformatics tools to a user interface. It is usable on all major Linux distributions, Mac OS, and Windows 10 or later

https://basestackwebsite.readthedocs.io/en/latest/

GNU General Public License v3.0

26 stars 1 forks source link

Prevent or remove spaces from manifest for barcode or sample names #31

Closed Merritt-Brian closed 3 years ago

Merritt-Brian commented 3 years ago

An error occurs about lack of 2 columns if manifest.txt does not have 2 columns

tmehoke commented 3 years ago

Additional observation on this issue - sample names (second column of manifest) need to not have underscores in their names. Can we add this check in along with spaces?