Open genegodbold opened 3 years ago
@jproesch I added some examples to this one.
@genegodbold I'm hesitant to make this a top level term as it is disconnected from the effects it is bringing about. Seems it is contributing primarily to indirect complement inactivation and dissemination in the examples above, both of which are already represented.
In immune evasion and subversion we have: 'inactivates host complement indirectly' -->'inactivates host complement by recruiting vitronectin' (these labels is clunky and probably need to be revised anyway) one solution could be to add a sibling term, something like -->'inactivates host complement by plasminogen binding'
This is not a great solution, but possibly fits better with the existing structure.
for dissemination, currently this would probably be the logical place: mediates dissemination -->mediates host barrier traversal
but additional supporting substructure would be needed.
Overall this hits on the issue of needing to capture primary and downstream effects, and trying to facilitate that while keeping the organizational structure intact...
@jproesch There are dozens of things that mediate complement activation/inactivation or dissemination that don't bind plasminogen. This is a way to distinguish the things that do bind. Binding host fibrinogen is similar. I think it is good to note.
Also, binding plasminogen doesn't necessarily lead to complement activation OR dissemination. I'm trying to cover the bases.
There are at least two dozen bacterial sequences of concern that bind host plasminogen to their surfaces. This bound plasmin is generally converted to plasmin which can then mediate serum resistance for the bacteria (this would be through the indirect activation of host complement). See issue #82.
For new term requests, please provide the following information:
Preferred term label
Binds host plasminogen/plasmin
Synonyms
None
Textual definition
These proteins of parasites specifically associate with the host protein plasminogen, usually securing it to the surface of the parasite where the plasminogen can be converted to the proteolytically active form and exert its effects which can include serum resistance and dissemination in host.
Examples
Suggested parent term
I don't think it can go lower than be a child of parent PATHGO_0000073 Determinant of pathogenicity. Plasminogen is found in blood and blood-bathed tissues and isn't a cell surface component.
Attribution
https://orcid.org/0000-0002-5702-4690