TaxTriage is a Nextflow workflow designed to agnostically identify and classify microbial organisms within short- or long-read metagenomic NGS data. This flexible tool was developed with various use-cases of mNGS in mind.
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Allow Multi FASTA input for `--reference_fasta` parameter #71
Currently, only the first fasta is used in the --reference_fasta parameter, allow multiple fastas to be added. Additionally, provide support for a directory of fasta files
Merritt-Brian
commented
1 week ago
Description of feature
Currently, only the first fasta is used in the
--reference_fastaparameter, allow multiple fastas to be added. Additionally, provide support for a directory of fasta filesWill likely need to disable
bt2_indicesto do so