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jhudsl / AnVIL_Template

An OTTR spinoff template for creating AnVIL content
https://jhudatascience.org/AnVIL_Template/
Creative Commons Attribution 4.0 International
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add-user-guides #164

Closed ehumph closed 2 years ago

ehumph commented 2 years ago

Adding user guide modules for Jupyter Notebook, Galaxy, and RStudio to the AnVIL Template

github-actions[bot] commented 2 years ago

No spelling errors! :tada: Comment updated at 2022-10-14 with changes from b29acdd6edce6235f6cae493331bca4c748b4119

github-actions[bot] commented 2 years ago

No broken URLs detected! :tada: Comment updated at 2022-10-06 with changes from eeaa926e30965e67cf3d13a5666dc934cb4fb18d

github-actions[bot] commented 2 years ago

Re-rendered previews from the latest commit:

Updated at 2022-10-14 with changes from b29acdd6edce6235f6cae493331bca4c748b4119

ehumph commented 2 years ago

@KatherineCox I think I've created the child files correctly

avahoffman commented 2 years ago

Looks good! I wonder if it's worth having these render in a preview in one of the main .Rmds so future us can see what they look like before inserting them into our course? Downside is this makes it take a bit longer to render.

ehumph commented 2 years ago

@avahoffman Ask and ye shall receive. (: I initially created all of these in the Student Guide and have them rendered in preview there. I'll send you the link to the PR

avahoffman commented 2 years ago

@ehumph I like that they are child docs, because then they can be borrowed modularly. The preview is just bonus, and not necessarily required. I could go either way :)

ehumph commented 2 years ago

Here's the preview! @avahoffman Katie is the one who suggested making them child docs, so she deserves all the credit for it. (:

https://github.com/fhdsl/AnVIL_Book_Student_Guide/pull/6

avahoffman commented 2 years ago

Sorry, should have been more clear. I meant including something like

cow::borrow_chapter(
  doc_path = "child/_child_galaxy_delete.Rmd",
  repo_name = "jhudsl/AnVIL_Template"
)

In this repository. That way, users know exactly what to copy. It can be used in the student guide too! Thoughts?

ehumph commented 2 years ago

Oh, haha, that make way more sense. Yes, I think having the code right there makes a ton of sense.

ehumph commented 2 years ago

@avahoffman I added a .rmd that includes code for borrowing any of the platform guides.

github-actions[bot] commented 2 years ago

No broken urls! :tada: Comment updated at 2022-10-14 with changes from b29acdd6edce6235f6cae493331bca4c748b4119