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jiabowang / GAPIT

Genome Association Predict Integrate Tools
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blink for kmer GWAS #130

Open dosshra opened 2 months ago

dosshra commented 2 months ago

I wonder if blink can be used for kmer based GWAS using kmer presence absence matrix without positions of the kmer on a reference genome.
Thank you

jiabowang commented 1 month ago

Yes, that depends on your coding genotype for multiple mutations.