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jiabowang / GAPIT

Genome Association Predict Integrate Tools
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Manual P-value Threshold #83

Open cassondranewman opened 10 months ago

cassondranewman commented 10 months ago

Hello, Thank you for the tool. Can you share how a user can manually define a p-value threshold for significance. I would like to change where the green line falls in the output plots.

Thank you

jiabowang commented 10 months ago

Please ref below chapters. Wang2022_Protocol_PerformingGenome-WideAssociati.pdf Wang2022_Protocol_InterpretationOfManhattanPlots.pdf