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jianhong / ChIPpeakAnno

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save featureAlignedHeatmap output to picture file ? #9

Open jupollet opened 3 years ago

jupollet commented 3 years ago

Hi, I don't find how to save featureAlignedHeatmap output to a picture file. I try the method with png function followed by the featureAlignedHeatmap command and dev.off() but the image is white. I also try ggsave but there are only legend and track but no heatmaps.

Thank you in advance for your help.

jianhong commented 3 years ago

Could you share me the data to repeat your issue?

And That function is using grid but not ggplot. So ggsave will not work.

Jianhong.

jupollet commented 3 years ago

I save the Rdata on the cluster and upload it locally. featureAlignedHeatmap output perfectely on a rmarkdown chunks in my local Rstudio with the bioconductor version 1.14.4 but totally blank in the classic graph windows. On the cluster, I work with the latest conda version (1.14.4 too ). Thanks