tangram_bam build error

[mpw6]

Was able to build everything except tangram_bam. Error log below:

• Building in TangramBam
  • compiling tangram_bam.cpp tangrambam.cpp: In function 'void GetZa(const Alignment&, const Alignment&, std::string)': tangram_bam.cpp:161: error: call of overloaded 'to_string(const uint16_t&)' is ambiguous /usr/lib/gcc/x86_64-redhat-linux/4.4.6/../../../../include/c++/4.4.6/bits/basic_string.h:2604: note: candidates are: std::string std::to_string(long long int) /usr/lib/gcc/x86_64-redhat-linux/4.4.6/../../../../include/c++/4.4.6/bits/basic_string.h:2610: note: std::string std::to_string(long long unsigned int) /usr/lib/gcc/x86_64-redhat-linux/4.4.6/../../../../include/c++/4.4.6/bits/basic_string.h:2616: note: std::string std::to_string(long double) tangram_bam.cpp:171: error: call of overloaded 'to_string(const uint16_t&)' is ambiguous /usr/lib/gcc/x86_64-redhat-linux/4.4.6/../../../../include/c++/4.4.6/bits/basic_string.h:2604: note: candidates are: std::string std::to_string(long long int) /usr/lib/gcc/x86_64-redhat-linux/4.4.6/../../../../include/c++/4.4.6/bits/basic_string.h:2610: note: std::string std::to_string(long long unsigned int) /usr/lib/gcc/x86_64-redhat-linux/4.4.6/../../../../include/c++/4.4.6/bits/basic_string.h:2616: note: std::string std::to_string(long double) tangram_bam.cpp: In function 'void WriteAlignment(std::map<std::basic_string<char, std::char_traits, std::allocator >, Alignment, std::less<std::basic_string<char, std::char_traits, std::allocator > >, std::allocator<std::pair<const std::basic_string<char, std::chartraits, std::allocator >, Alignment> > >, BamTools::BamWriter_)': tangram_bam.cpp:197: error: call of overloaded 'to_string(uint16_t&)' is ambiguous /usr/lib/gcc/x86_64-redhat-linux/4.4.6/../../../../include/c++/4.4.6/bits/basic_string.h:2604: note: candidates are: std::string std::to_string(long long int) /usr/lib/gcc/x86_64-redhat-linux/4.4.6/../../../../include/c++/4.4.6/bits/basic_string.h:2610: note: std::string std::to_string(long long unsigned int) /usr/lib/gcc/x86_64-redhat-linux/4.4.6/../../../../include/c++/4.4.6/bits/basic_string.h:2616: note: std::string std::to_string(long double) tangram_bam.cpp:201: error: call of overloaded 'to_string(uint16_t&)' is ambiguous /usr/lib/gcc/x86_64-redhat-linux/4.4.6/../../../../include/c++/4.4.6/bits/basic_string.h:2604: note: candidates are: std::string std::to_string(long long int) /usr/lib/gcc/x86_64-redhat-linux/4.4.6/../../../../include/c++/4.4.6/bits/basic_string.h:2610: note: std::string std::to_string(long long unsigned int) /usr/lib/gcc/x86_64-redhat-linux/4.4.6/../../../../include/c++/4.4.6/bits/basic_string.h:2616: note: std::string std::to_string(long double) tangram_bam.cpp:205: error: call of overloaded 'to_string(uint16_t&)' is ambiguous /usr/lib/gcc/x86_64-redhat-linux/4.4.6/../../../../include/c++/4.4.6/bits/basic_string.h:2604: note: candidates are: std::string std::to_string(long long int) /usr/lib/gcc/x86_64-redhat-linux/4.4.6/../../../../include/c++/4.4.6/bits/basic_string.h:2610: note: std::string std::to_string(long long unsigned int) /usr/lib/gcc/x86_64-redhat-linux/4.4.6/../../../../include/c++/4.4.6/bits/basic_string.h:2616: note: std::string std::tostring(long double) make[1]: ** [/home/mpw6/Tangram/obj/tangram_bam.o] Error 1

[jiantao]

Hi Mike,

We are looking into this problem and will get you back as soon as possible.

Thank you, Jiantao

[wanpinglee]

Here might be the answer of this issue (http://stackoverflow.com/questions/10664699/stdto-string-more-than-instance-of-overloaded-function-matches-the-argument) and I made the modification. The issue should be gone.