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jiarong / VirSorter2

customizable pipeline to identify viral sequences from (meta)genomic data
GNU General Public License v2.0
225 stars 31 forks source link

about conda #183

Closed ZT-ls closed 1 year ago

ZT-ls commented 1 year ago

Hi, i am encounting a issue when runing virsorter2 which just like this 微信图片_20231123013947 i noticed that virsorter2 might created a new env in db when running , but unfortunately, i am using a public computing cluster and the node that was assigned the job was not able to connect the web, thus, it unable to create the env for conda, can virsorter2 run without this env-creating step? thank you very much

ZT-ls commented 1 year ago

i added the --use-conda-off option and it works, thank you still