jinworks / CellChat

R toolkit for inference, visualization and analysis of cell-cell communication from single-cell and spatially resolved transcriptomics
GNU General Public License v3.0
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Non-protein Signaling DB is empty #19

Open fatcat-del opened 11 months ago

fatcat-del commented 11 months ago

Recently, I update from cellchat to cellchatv2 and noticed that a new dataset non protein signalig DB but it's empty, i don't known how to use it I'm wondering whether it's my mistake or the data i did not download correctly 1700742487655

sqjin commented 11 months ago

@fatcat-del You should do it as CellChatDB.use <- subsetDB(CellChatDB, search = "Non-protein Signaling", key = "annotation", non_protein = TRUE). Now I also modify the codes so that your codes also work.

fatcat-del commented 11 months ago

@fatcat-del You should do it as . Now I also modify the codes so that your codes also work.CellChatDB.use <- subsetDB(CellChatDB, search = "Non-protein Signaling", key = "annotation", non_protein = TRUE)

Wow, It‘s worked thanks a lot