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jisraeli / DeepBind

Training and testing of DeepBind models.
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demo_convnet.py run with error for the reason of libsmat_cudnn.so #1

Open kuixu opened 8 years ago

kuixu commented 8 years ago

demo_convnet.py run with error for the reason of libsmat_cudnn.so code/libs/smat/py/demo_convnet.py $ demo_convnet.py --device 1 code/libs/smat/build/release/bin/libsmat_cudnn.so: cannot open shared object file: No such file or directory and then I found that libsmat_cudnn.so is not being compiled in folder code/libs/smat/build/release/bin check the makefile , found smat_cudnn is not compiled by default. so I try to re-compile, and failed with collect2: error: ld returned 1 exit status make: *\ [../build/release/bin/libsmat_cudnn.so] Error 1

sadly failed， please help！

jisraeli commented 8 years ago

I'd recommend contacting the DeepBind paper authors about this issue.

The DragoNN package provide a simple toolkit to get started with deep learning modeling of regulatory sequence, you may want to check it out: https://github.com/kundajelab/dragonn