A deep learning approach for predicting high-confidence neoantigens by considering both the presentation possibilities of mutant peptides and the potential immunogenicity of pMHC
在使用setup.py安装之后，使用推荐的单肽段检测方法，会出现如下的问题，这个问题应该怎么解决呢？
(wanggj) wanggj@kemove-System-Product-Name:~$ deephlapan -P LNIMNKLNI -H HLA-A02:01
Traceback (most recent call last):
File "/home/wanggj/.conda/envs/wanggj/bin/deephlapan", line 4, in import('pkg_resources').run_script('deephlapan==1.1', 'deephlapan')
File "/home/wanggj/.conda/envs/wanggj/lib/python3.7/site-packages/pkg_resources/init.py", line 662, in run_script
self.require(requires)[0].run_script(script_name, ns)
File "/home/wanggj/.conda/envs/wanggj/lib/python3.7/site-packages/pkg_resources/init.py", line 1459, in run_script
exec(code, namespace, namespace)
File "/home/wanggj/.conda/envs/wanggj/lib/python3.7/site-packages/deephlapan-1.1-py3.7.egg/EGG-INFO/scripts/deephlapan", line 3, in
from deephlapan.deephlapan_main import *
File "/home/wanggj/.conda/envs/wanggj/lib/python3.7/site-packages/deephlapan-1.1-py3.7.egg/deephlapan/deephlapan_main.py", line 13, in
from attention import Attention
ModuleNotFoundError: No module named 'attention'
wujingcheng
commented
2 years ago
在使用setup.py安装之后，使用推荐的单肽段检测方法，会出现如下的问题，这个问题应该怎么解决呢？ (wanggj) wanggj@kemove-System-Product-Name:~$ deephlapan -P LNIMNKLNI -H HLA-A02:01 Traceback (most recent call last): File "/home/wanggj/.conda/envs/wanggj/bin/deephlapan", line 4, in
import('pkg_resources').run_script('deephlapan==1.1', 'deephlapan')
File "/home/wanggj/.conda/envs/wanggj/lib/python3.7/site-packages/pkg_resources/init.py", line 662, in run_script
self.require(requires)[0].run_script(script_name, ns)
File "/home/wanggj/.conda/envs/wanggj/lib/python3.7/site-packages/pkg_resources/init.py", line 1459, in run_script
exec(code, namespace, namespace)
File "/home/wanggj/.conda/envs/wanggj/lib/python3.7/site-packages/deephlapan-1.1-py3.7.egg/EGG-INFO/scripts/deephlapan", line 3, in
from deephlapan.deephlapan_main import *
File "/home/wanggj/.conda/envs/wanggj/lib/python3.7/site-packages/deephlapan-1.1-py3.7.egg/deephlapan/deephlapan_main.py", line 13, in
from attention import Attention
ModuleNotFoundError: No module named 'attention'
如果直接使用deephlapan_main.py， 不会报任何错误但也不会有任何输出？ 感谢您的回复