Generate pathway maps without comparison

jiwoongbio / FMAP

Functional Mapping and Analysis Pipeline for metagenomics and metatranscriptomics studies

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Generate pathway maps without comparison #12

Open ehj000 opened 5 years ago

ehj000 commented 5 years ago

Hi, I find the tool promising, but I was wondering if it is possible to run the analysis without comparing two groups? For example if I have samples from unique environments, and I want to explore what pathways that are present in a single sample. Thanks in advanced Erik

jiwoongbio commented 4 years ago

"HUMAnN" is a good program to identify the pathways involved in the metagenome sample without comparison.