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jiyuuchc / lacss

A deep learning model for single cell segmentation from microsopy images.
https://jiyuuchc.github.io/lacss/
MIT License
31 stars 5 forks source link

Your code in google collab are not working expect Inference.py #12

Closed codesmith25103 closed 1 month ago

codesmith25103 commented 1 month ago

While running the Supervised Training.ipynb in google collab. I got error "TypeError: Lacss.call() got an unexpected keyword argument 'gt_locations'". image

codesmith25103 commented 1 month ago

While running "point with label only.ipynb". I am getting thise error image

jiyuuchc commented 1 month ago

Please use the lacss1 branch for now.

If you are testing on CoLab, use the link: https://colab.research.google.com/github/jiyuuchc/lacss/blob/lacss1/notebooks/train_with_point_label.ipynb

The main branch has been undergoing a lot of updates (to support 3D segmentation, GRPC services etc) and we expect things to be somewhat broken for a while, until the release of 0.14

Ji

lphilomena commented 1 month ago

Hi，is the main branch working now? I met the same error when running "train_with_point_label.py".

codesmith25103 commented 1 month ago

@jiyuuchc Thanks for CoLab link. It is working fine