Open 18270020070 opened 2 years ago
In most of the cases, you will need to do this manually by looking at the peak position/shape. Once the peaks are picked, you can potentially automate this using the unit_conversion
object, but you will should plot and see whether the limits you chose are appropriate. For example, you can use something like:
# generate the universal dictionary (udic) depending on your data format
# generate unit conversion object
uc = {i: ng.fileiobase.uc_from_udic(udic, dim=i) for i in (0, 1)}
# select a 1 ppm box around a 2d peak at the position (x=50ppm, y=55ppm)
x, y = 50, 55
delta = 1
x0, x1 = uc[1].i(x - delta, "ppm"), uc[1].i(x + delta, "ppm")
y0, y1 = uc[0].i(y - delta, "ppm"), uc[0].i(y + delta, "ppm")
In most of the cases, you will need to do this manually by looking at the peak position/shape. Once the peaks are picked, you can potentially automate this using the
unit_conversion
object, but you will should plot and see whether the limits you chose are appropriate. For example, you can use something like:# generate the universal dictionary (udic) depending on your data format # generate unit conversion object uc = {i: ng.fileiobase.uc_from_udic(udic, dim=i) for i in (0, 1)} # select a 1 ppm box around a 2d peak at the position (x=50ppm, y=55ppm) x, y = 50, 55 delta = 1 x0, x1 = uc[1].i(x - delta, "ppm"), uc[1].i(x + delta, "ppm") y0, y1 = uc[0].i(y - delta, "ppm"), uc[0].i(y + delta, "ppm")
Thank you very much for your answer, I think I have an idea.
The module code directly reads the limits.in file, but I wonder how the file is obtained, such as x0, y0, x1, y1 in the file. Whether according to the spectral peak Add or subtract a certain value from the xy coordinate value to get? Thanks a lot for your answer.