error of Specifing mode

jjmiao1314 / 16sPIP

16sPIP: A Comprehensive Analysis Pipeline for Rapid Pathogen Detection in Clinical Samples Based on 16S Metagenomic Sequencing

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Open surajmetha55 opened 6 years ago

surajmetha55 commented 6 years ago

I am trying the following command on my 16S dataset

./16sPIP.sh -i 1_R1.fq -r 1_R2.fq -f fastq -p /home/bioinfo_14/human/16sPIP/db/155pathogens.fa. -m fast

but even with and without Specifying mode, it gives me following error:

Specify the analysis mode: fast or sensitive [fast]

ericbrzoska commented 1 year ago

Did you found an alternative tool?