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jlparkI / AntPack

Tools for annotation, processing and ML for antibody sequences
https://antpack.readthedocs.io/en/latest/index.html
GNU General Public License v3.0
18 stars 2 forks source link

build error #5

Closed shizipo closed 5 months ago

shizipo commented 5 months ago

gcc -pthread -B /home/software/miniconda3.8/compiler_compat -Wl,--sysroot=/ -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -fPIC -Iantpack/ext -I/tmp/pip-build-env-po0wrd9h/overlay/lib/python3.8/site-packages/pybind11/include -I/home/software/miniconda3.8/include/python3.8 -c antpack/ext/aligner.cpp -o build/temp.linux-x86_64-cpython-38/antpack/ext/aligner.o -std=c++11 -fvisibility=hidden -g0 -std=c++11 -fvisibility=hidden cc1plus: warning: command line option ‘-Wstrict-prototypes’ is valid for C/ObjC but not for C++ [enabled by default] In file included from antpack/ext/aligner.cpp:1:0: antpack/ext/aligner.h:126:55: error: array must be initialized with a brace-enclosed initializer "Unexpected AA at conserved position."}; ^ antpack/ext/aligner.h:126:55: error: too many initializers for ‘std::array<std::basic_string, 6ul>’ error: command '/usr/bin/gcc' failed with exit code 1

ERROR: Failed building wheel for antpack Failed to build antpack ERROR: Could not build wheels for antpack which use PEP 517 and cannot be installed directly

jlparkI commented 5 months ago

Looks like this is an error specific to older versions of gcc. At one time, C++11 required double curly braces for array initialization (https://en.cppreference.com/w/cpp/container/array), but not subsequent to the CWG 1270 revision or at any time thereafter. I can will fix this in the next release.

shizipo commented 5 months ago

I'm glad to receive your reply so quickly. The above error has been resolved. Thank you very much!