Autoscale script expects FaNDOM executable in wrong(?) place

jluebeck / FaNDOM

Fast Nested Distance aligner for Optical Maps

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Autoscale script expects FaNDOM executable in wrong(?) place #2

Closed ebioman closed 3 years ago

ebioman commented 3 years ago

Hi Thanks a lot for this great tools, really appreciate them. Little remark concerning independent run of autoscaling. I followed your installation instructions and the FaNDOM itself is in my PATH and execution works well. The autoscaling script expects though the executable in the place of execution and does not pick up path of FaNDOM executable up itself. The documented option to provide it's path seems obsolete

siavashre commented 3 years ago

Hi ebioman,

Great finding! Thank you so much for pointing this. I fixed it.

Sincerely, Siavash