Scanpy or Seurat interface

jmbreda / Sanity

Filtering of Poison noise on a single-cell RNA-seq UMI count matrix

GNU General Public License v3.0

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Open qinqian opened 3 years ago

qinqian commented 3 years ago

Dear authors,

Thank you for presenting such a great tool, do you consider implementing the interfaces for common tools like Scanpy or Seurat?

Best, Qian

dominikburri commented 2 years ago

Agree, it would be nice to include the method in Bioconductor to directly get normalised counts from a SingleCellExperiment or Seurat object.