BA.5.6.0 is a proposed sublineage of BA.5.6 that includes 4957 samples.
It was identified from the tree file gisaidAndPublic.2022-10-02.proposed.pb as the descendents of node_1863519.
The earliest dated sample was found on 2021-12-14.
The latest dated sample was found on 2022-09-22.
It is found in 46 countries, most commonly USA where 85.00% of its samples were sequenced.
BA.5.6.0 has a Bloom Lab escape score of 0.45, unchanged from the parent lineage.
The following mutations are directly associated with the lineage root node: C14925T. There are 2 mutations from the parent lineage overall.
The following protein changes are directly associated with the lineage root node: . There are 1 defining protein changes overall.
NOTE: The following links search by genotype and parent lineage; they may additionally highlight samples outside of the proposed clade that convergently evolved the same mutations or that were added after this lineage was inferred,
or not display or highlight samples which reverted some of the key changes or were removed after this lineage was inferred. They may also take a moment to complete the search on loading.
The following samples are included in this proposal:
USA/JW6837/2022|ON892655.1|2022-06-15
Canada/ON-PHL-22-37305/2022|EPI_ISL_14843309|2022-08-25
USA/CA-HLX-STM-WFMBMGMMH/2022|EPI_ISL_15045175|2022-07-16
USA/WA-CDC-LC0815579/2022|OP223940.1|2022-07-27
USA/NY-CDC-QDX41123762/2022|OP488967.1|2022-09-06
USA/NY-URMC-220888886-1/2022|EPI_ISL_15144961|2022-08-31
USA/LA-EVTL14994/2022|OP395080.1|2022-07-02
USA/AL-CDC-STM-GNKPV4F3X/2022|ON837085.1|2022-06-13
USA/FL-CDC-LC0758675/2022|OP013528.1|2022-06-27
USA/AL-CDC-STM-3Q7TEQCCY/2022|OP260629.1|2022-08-03
USA/CA-CDC-QDX37706478/2022|ON828932.1|2022-06-01
USA/TX-CDC-STM-RW9MNW9WK/2022|OP107112.1|2022-07-16
USA/RI-RISHL-E05006/2022|EPI_ISL_14430147|2022-07-19
USA/IL-CDC-QDX40314334/2022|OP338699.1|2022-08-14
USA/NJ-CDC-LC0858349/2022|OP386684.1|2022-08-23
As well as 4942 additional samples.
BA.5.6.0 is a proposed sublineage of BA.5.6 that includes 4957 samples.
It was identified from the tree file gisaidAndPublic.2022-10-02.proposed.pb as the descendents of node_1863519.
The earliest dated sample was found on 2021-12-14.
The latest dated sample was found on 2022-09-22.
It is found in 46 countries, most commonly USA where 85.00% of its samples were sequenced.
BA.5.6.0 has a Bloom Lab escape score of 0.45, unchanged from the parent lineage.
The following mutations are directly associated with the lineage root node: C14925T. There are 2 mutations from the parent lineage overall.
The following protein changes are directly associated with the lineage root node: . There are 1 defining protein changes overall.
NOTE: The following links search by genotype and parent lineage; they may additionally highlight samples outside of the proposed clade that convergently evolved the same mutations or that were added after this lineage was inferred, or not display or highlight samples which reverted some of the key changes or were removed after this lineage was inferred. They may also take a moment to complete the search on loading.
View it on cov-spectrum
View it on taxonium
The following samples are included in this proposal: USA/JW6837/2022|ON892655.1|2022-06-15 Canada/ON-PHL-22-37305/2022|EPI_ISL_14843309|2022-08-25 USA/CA-HLX-STM-WFMBMGMMH/2022|EPI_ISL_15045175|2022-07-16 USA/WA-CDC-LC0815579/2022|OP223940.1|2022-07-27 USA/NY-CDC-QDX41123762/2022|OP488967.1|2022-09-06 USA/NY-URMC-220888886-1/2022|EPI_ISL_15144961|2022-08-31 USA/LA-EVTL14994/2022|OP395080.1|2022-07-02 USA/AL-CDC-STM-GNKPV4F3X/2022|ON837085.1|2022-06-13 USA/FL-CDC-LC0758675/2022|OP013528.1|2022-06-27 USA/AL-CDC-STM-3Q7TEQCCY/2022|OP260629.1|2022-08-03 USA/CA-CDC-QDX37706478/2022|ON828932.1|2022-06-01 USA/TX-CDC-STM-RW9MNW9WK/2022|OP107112.1|2022-07-16 USA/RI-RISHL-E05006/2022|EPI_ISL_14430147|2022-07-19 USA/IL-CDC-QDX40314334/2022|OP338699.1|2022-08-14 USA/NJ-CDC-LC0858349/2022|OP386684.1|2022-08-23 As well as 4942 additional samples.