BA.5.2.1.0 is a proposed sublineage of BA.5.2.1 that includes 3608 samples.
It was identified from the tree file gisaidAndPublic.2022-10-11.proposed.pb as the descendents of node_2024519.
The earliest dated sample was found on 2022-02-09.
The latest dated sample was found on 2022-10-03.
It is found in 64 countries, most commonly Japan where 55.00% of its samples were sequenced.
BA.5.2.1.0 has a Bloom Lab escape score of 0.45, unchanged from the parent lineage.
Full mutational path from the ancestral lineage to the proposed sublineage: T6979G>C26625T>C27371T>T2112C
Full amino acid change path from the ancestral lineage to the proposed sublineage: >>ORF6:P57L>ORF1ab:I616T
NOTE: The following links search by genotype and parent lineage; they may additionally highlight samples outside of the proposed clade that convergently evolved the same mutations or that were added after this lineage was inferred,
or not display or highlight samples which reverted some of the key changes or were removed after this lineage was inferred. They may also take a moment to complete the search on loading.
The following samples are included in this proposal:
Japan/PG-330131/2022|EPI_ISL_14641819|2022-08-10
Japan/PG-272993/2022|EPI_ISL_14133349|2022-06-30
India/OR-RMRC_B-ICMR-INSACOG-BBS427097/2022|EPI_ISL_14479695|2022-07-22
Japan/PG-340364/2022|EPI_ISL_14877429|2022-08-13
USA/SC-CDC-QDX39078848/2022|OP127505.1|2022-07-16
Japan/TKYkbm32366/2022|EPI_ISL_14345436|2022-07-08
Denmark/DCGC-584560/2022|EPI_ISL_15154946|2022-09-21
Japan/PG-352772/2022|EPI_ISL_15244933|2022-09-01
Denmark/2022|OX238978.1|2022-07-07
Japan/TKYkbm27584/2022|EPI_ISL_14089066|2022-07-02
USA/MN-CDC-STM-FJ8YDPGP5/2022|ON974697.1|2022-06-30
Japan/PG-328488/2022|EPI_ISL_14640256|2022-07-28
USA/CA-HLX-STM-9PUN4ZE3B/2022|EPI_ISL_13586556|2022-06-15
Japan/TKYkbm44416/2022|EPI_ISL_14862663|2022-07-19
Japan/PG-336467/2022|EPI_ISL_14873808|2022-08-05
As well as 3593 additional samples.
BA.5.2.1.0 is a proposed sublineage of BA.5.2.1 that includes 3608 samples.
It was identified from the tree file gisaidAndPublic.2022-10-11.proposed.pb as the descendents of node_2024519.
The earliest dated sample was found on 2022-02-09.
The latest dated sample was found on 2022-10-03.
It is found in 64 countries, most commonly Japan where 55.00% of its samples were sequenced.
BA.5.2.1.0 has a Bloom Lab escape score of 0.45, unchanged from the parent lineage.
Full mutational path from the ancestral lineage to the proposed sublineage: T6979G>C26625T>C27371T>T2112C
Full amino acid change path from the ancestral lineage to the proposed sublineage: >>ORF6:P57L>ORF1ab:I616T
NOTE: The following links search by genotype and parent lineage; they may additionally highlight samples outside of the proposed clade that convergently evolved the same mutations or that were added after this lineage was inferred, or not display or highlight samples which reverted some of the key changes or were removed after this lineage was inferred. They may also take a moment to complete the search on loading.
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The following samples are included in this proposal: Japan/PG-330131/2022|EPI_ISL_14641819|2022-08-10 Japan/PG-272993/2022|EPI_ISL_14133349|2022-06-30 India/OR-RMRC_B-ICMR-INSACOG-BBS427097/2022|EPI_ISL_14479695|2022-07-22 Japan/PG-340364/2022|EPI_ISL_14877429|2022-08-13 USA/SC-CDC-QDX39078848/2022|OP127505.1|2022-07-16 Japan/TKYkbm32366/2022|EPI_ISL_14345436|2022-07-08 Denmark/DCGC-584560/2022|EPI_ISL_15154946|2022-09-21 Japan/PG-352772/2022|EPI_ISL_15244933|2022-09-01 Denmark/2022|OX238978.1|2022-07-07 Japan/TKYkbm27584/2022|EPI_ISL_14089066|2022-07-02 USA/MN-CDC-STM-FJ8YDPGP5/2022|ON974697.1|2022-06-30 Japan/PG-328488/2022|EPI_ISL_14640256|2022-07-28 USA/CA-HLX-STM-9PUN4ZE3B/2022|EPI_ISL_13586556|2022-06-15 Japan/TKYkbm44416/2022|EPI_ISL_14862663|2022-07-19 Japan/PG-336467/2022|EPI_ISL_14873808|2022-08-05 As well as 3593 additional samples.