jmcbroome / auto-pango-designation

Repository for automated flagging of new lineages for pango designation.
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New Lineages Update: 7 new lineages active through 2022-12-01 #185

Closed jmcbroome closed 1 year ago

jmcbroome commented 1 year ago
Lineage Name Parent Lineage Initial Size Earliest Appearance Last Checked Latest Size Initially Circulating In Associated Changes View On Cov-Spectrum View On Taxonium (Public Samples Only)
auto.XBB.1.4.0 XBB.1.4 32 2022-10-10 2022-12-01 115 Denmark,Norway,Sweden,Austria,Iceland,Israel >S:S673G View On Cov-Spectrum View On Taxonium (Public Samples Only)
auto.BN.1.3 BN.1 39 2022-10-11 2022-12-01 75 Denmark,Canada,Austria,USA ORF1ab:F3753L,ORF1ab:H4831Y> View On Cov-Spectrum View On Taxonium (Public Samples Only)
auto.BQ.1.2.3 BQ.1.2 45 2022-09-07 2022-12-01 78 Mongolia,Turkey,USA,Japan,Israel,Netherlands,SouthKorea,England,Denmark,Germany,Spain N:H300N>ORF1ab:P5828S> View On Cov-Spectrum View On Taxonium (Public Samples Only)
auto.BQ.1.13.2 BQ.1.13 38 2022-10-10 2022-12-01 68 USA,Netherlands,England,Israel,Iceland,Australia,Canada >S:F157L> View On Cov-Spectrum View On Taxonium (Public Samples Only)
auto.BQ.1.23.2 BQ.1.23 28 2022-10-15 2022-12-01 43 Australia,Singapore,USA >>ORF1ab:D1939G View On Cov-Spectrum View On Taxonium (Public Samples Only)
auto.BQ.1.1.4.3 BQ.1.1.4 20 2022-10-18 2022-12-01 79 Denmark,Croatia,Australia,Israel,USA,Sweden ORF1ab:T1168A> View On Cov-Spectrum View On Taxonium (Public Samples Only)
auto.BQ.1.1.20.1 BQ.1.1.20 53 2022-10-24 2022-12-01 90 Denmark S:A1070V View On Cov-Spectrum View On Taxonium (Public Samples Only)