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jmcbroome / autolin

Repository containing a method for automatically identifying pathogen lineages from a phylogeny.
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error on simplify annotation step #8

Closed jcw349 closed 3 months ago

jcw349 commented 3 months ago

I keep getting an error on when on "strip_annotation" step.

Traceback (most recent call last): File "./strip_annotations.py", line 44, in t.apply_annotations(nannd) AttributeError: 'bte.MATree' object has no attribute 'apply_annotations'. Did you mean: 'apply_mutations'?

I can't tell if that's an issue with my conda install. I am also having issues accessing the documentation of the BTE functions: https://jmcbroome.github.io/BTE/build/html/index.html