Closed glennhickey closed 5 years ago
Yes, the SNP example is be good when presenting about genome graphs but for the paper this is much better. I aligned a bit the arrows and added the cartoon in the panel for fig1 with a legend:
" a) vg uses the read coverage over possible paths to genotype variants in a "bubble" (or snarl). The cartoon depicts the case of an heterozygous insertion and an homozygous deletion. The algorithm is described in more details in Methods."
Add a vg call cartoon, which could go into Figure 1a).
This is just a slight modification of what @jmonlong and @eldariont made in #70, where the SNP was changed for a deletion. (I like the SNP better, but we barely talk about them in the paper...)
Image source: https://docs.google.com/drawings/d/1XC4jeXnVKk9u4sAsNedKVZC-hhk1rHV7kUwxq4CHl_4/edit?usp=sharing