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jmonlong
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manu-vgsv
https://jmonlong.github.io/manu-vgsv/
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Make a figure to illustrate the SV evaluation approach
#68
jmonlong
closed
5 years ago
2
Integrating feedback from the shared Google Doc
#67
jmonlong
closed
5 years ago
1
discussion disclaimer
#66
glennhickey
closed
5 years ago
0
minor edits
#65
glennhickey
closed
5 years ago
0
Polish figures
#64
jmonlong
closed
5 years ago
0
more vg details in results
#63
glennhickey
closed
5 years ago
0
update intro
#62
glennhickey
closed
5 years ago
1
more consistent tenses in abstract
#61
glennhickey
closed
5 years ago
0
add corrections from full read-through
#60
eldariont
closed
5 years ago
0
Remove unnecessary figures
#59
eldariont
closed
5 years ago
2
Benchmark with GiaB that has only one individual
#58
jmonlong
closed
5 years ago
5
add table of strains and some more info to methods
#57
eldariont
closed
5 years ago
0
Add methods for yeast analysis
#56
eldariont
closed
5 years ago
0
Methods
#55
jmonlong
closed
5 years ago
2
Methods + no-calls results
#54
jmonlong
closed
5 years ago
0
Some re-wording at beginning of intro
#53
glennhickey
closed
5 years ago
0
Update genotyping results using all yeast strains
#52
eldariont
closed
5 years ago
0
differentiate 0/0 from ./.
#51
glennhickey
opened
5 years ago
1
Some breakpoint fine-tuning results on simulated SVs
#50
jmonlong
closed
5 years ago
0
Update methods
#49
glennhickey
closed
5 years ago
0
Update text with new figures/numbers
#48
jmonlong
closed
5 years ago
0
Updated figures: new samples/datasets + polish
#47
jmonlong
closed
5 years ago
0
Mostly inversions update
#46
jmonlong
closed
5 years ago
0
Normalized chmpd results
#45
glennhickey
closed
5 years ago
0
Exploring/explaining the amount of error in the simulation experiment
#44
jmonlong
opened
5 years ago
1
add mapping comparison plot for 5-strain graphs
#43
eldariont
closed
5 years ago
0
Inversions in the simulation experiment
#42
jmonlong
closed
5 years ago
1
Summary graph for HGSVC results
#41
jmonlong
closed
5 years ago
3
Add an inversion in the cartoon fig 1a
#40
jmonlong
closed
5 years ago
1
Evaluation: to normalize or not to normalize
#39
jmonlong
closed
5 years ago
1
Some text
#38
jmonlong
closed
5 years ago
0
Simulation figures: genotype, inversions and reworked
#37
jmonlong
closed
5 years ago
0
Complex inversions in the cactus-based graph?
#36
jmonlong
closed
5 years ago
7
add SVPOP smrt-sv curves
#35
glennhickey
closed
5 years ago
0
HGSVC genotyping evaluation
#34
jmonlong
closed
5 years ago
0
Update HGSVC results again
#33
glennhickey
closed
5 years ago
1
add Adam as a co-author
#32
glennhickey
closed
5 years ago
1
Reorganize figures with pdf/png files and multi-panel figures
#31
jmonlong
closed
5 years ago
0
Tools and resources for running
#30
glennhickey
opened
5 years ago
0
Inversions!
#29
glennhickey
closed
5 years ago
3
add missing plots
#28
eldariont
closed
5 years ago
0
New yeast plots + figure dir restructuring
#27
eldariont
closed
5 years ago
0
Update HGSVC result for BayesTyper on real reads and make colors consistent in figures
#26
jmonlong
closed
5 years ago
0
update HGSVC bayestyper results to latest version
#25
glennhickey
closed
5 years ago
0
results for latest vg for real-hgsvc-construct
#24
glennhickey
closed
5 years ago
0
Better simulation experiment
#23
jmonlong
closed
5 years ago
0
Update vg hgsvc results
#22
glennhickey
closed
5 years ago
1
Add svtyper and Delly PR curves
#21
jmonlong
closed
5 years ago
0
Preliminary Delly results for HGSVC
#20
jmonlong
closed
5 years ago
0
Minisim: bayestyper with no min gt filter
#19
jmonlong
closed
5 years ago
0
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