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jmschrei
/
bpnet-lite
This repository hosts a minimal version of a Python API for BPNet.
MIT License
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Update setup.py
#14
adamyhe
closed
1 month ago
1
VRAM issues in ChromBPNet.fit
#13
adamyhe
opened
2 months ago
1
Calling hits with FiNeMo / marginalize?
#12
gregorydonahue
opened
3 months ago
2
ATAC-seq pre-processing: shifting tags
#11
gregorydonahue
closed
3 months ago
2
Error in running bpnet negatives / tangermeme match.py issues
#10
gregorydonahue
closed
3 months ago
4
Mislabeling of functions from bpnetlite.io in the example code for Python API
#9
Renee-Napoliello
opened
3 months ago
1
output dtype error in bpnet negatives
#8
adamyhe
closed
3 months ago
2
Practical limit on # input peaks
#7
gregorydonahue
closed
3 months ago
2
Reasonable values for beta parameter in ATAC-seq chrombpnet run
#6
gregorydonahue
closed
3 months ago
3
updated paddding from int to tuple
#5
adamklie
closed
3 months ago
6
Error in printing model loaded from chrombpnet package
#4
adamklie
closed
3 months ago
0
bpnetlite.attributions.dinucleotide_shuffle errors out when there is less than 4 nucleotides in the sequence
#3
gokceneraslan
closed
11 months ago
5
TOMTOM missed
#2
wang3702
closed
1 year ago
4
Question: does BPNet code support any seq length?
#1
vitkl
opened
1 year ago
22