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jmsigner / amt

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missing data from amt arXiv #5

Closed CTO22 closed 5 years ago

CTO22 commented 5 years ago

Can you push the data relating to the fisher use cases: dat <- read_csv("data/Martes pennanti LaPoint New York.csv") %>% -and- land_use <- raster("data/landuse_study_area.tif") to the master? I tried accessing the . rda and it is not loading and those data are not available with the package.

Thus I can not run the code provided in the supplement to the arXiv (8 May 2018)

CTO22 commented 5 years ago

Note I was able to get the data via:

loginStored <- movebankLogin(username="MovebankWorkshop", assword="genericuserforthisexercise") getMovebankStudy(study="Martes pennanti LaPoint New York", login=loginStored) # see study-level nfo fisher.move <- getMovebankData(study="Martes pennanti LaPoint New York", login=loginStored)

fisher.dat <- as(fisher.move, "data.frame")

dat <- fisher.dat %>% filter(!is.na("location_lat")) %>% select(x = "location_long", y = "location_lat", t = "timestamp", id = "local_identifier") %>% filter(id %in% c("F1", "F2", "F3", "M1", "M2", "M3")) # for example 2

assuming the first 3 males are the ones referenced in the supplement

jmsigner commented 5 years ago

The landuse data is included in amt now (not properly documented yet). You can load it with: 

data("amt_fisher_lu", package = "amt")