jncc / vsas-app-development

This repository contains code generated by Idox Group, for the development of the Voluntary Seabirds At Sea Application upgrade 2023.
MIT License
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App does not record codes in the background for behaviours or associations #74

Open Emmawilsonjncc opened 8 months ago

Emmawilsonjncc commented 8 months ago

Can app record behaviour and association codes in the background, the same way it does for species (speccode)?

Note - I don't think we have previously discussed this but having now seen what data coming out of the app looks like, I think having the app record codes for behaviour and association could be really useful.

ClaireLush commented 7 months ago

@Emmawilsonjncc @timedunn Please could you provide a spreadsheet with the code for each behaviour/association

timedunn commented 7 months ago

Hi Claire,

Here are the codes for the behaviours and associations.

Note, this is the full list and we only need the ones that Emma sent to you earlier to be included in the app.

@Emma @.> @Brad @.> I had to add some additional (ESAS) codes that were not on the SAS database lookup file and also had to use the ESAS codes for the associations (interacting with field on the app.), as the SAS.db doesn't appear to include these. I have saved the attached file in T:\Programme 072 Marine Monitoring\207 Seabird and Cetacean Monitoring Advice\Databases\SAST\Data management\WPDOX\CSV.

Thanks,

Tim

ClaireLush commented 7 months ago

@timedunn The terms in Emma's Behaviours_Association_options_March_24_V2 don't exactly match the lists you provided. I have matched the terms to the following codes. Please could you check and let me know if I have got any wrong?

Interacting With Code Description
Buoy 22 Associated with or on buoy
Cetaceans 11 Associated with cetaceans
Fish shoal 10 Associated with fish shoal
Fishing vessel 26 Associated with fishing vessel
Inside wind farm 110 Inside wind farm
Land (not on land) 28 Associated with land (e.g. colony)
Litter 15 Associated with floating litter
Multispecies feeding group 50 MSFA participant, no further details
Observation base 19 Sitting on observation base
Oil slick 16 Associated with oil slick
Other vessel 21 Associated with other vessel
Seaweed 17 Associated with floating seaweed
Sitting on wind turbine 116 Sitting on wind turbine (foundation)
Behaviour Code Description Category
Approaching ship 83 Approaching ship Cetaceans
At the bow of the ship 74 At the bow of the ship Cetaceans
Breaching 73 Breaching clear out of the water Cetaceans
Calf at the tail of adult 77 Calf at the tail of adult Cetaceans
Calf swimming freely in herd 78 Calf swimming freely in herd Cetaceans
Only blow visible (whales) 84 Only blow visible (whales) Cetaceans
Play 88 Play Cetaceans
Pod formation 124 Pod formation Cetaceans
Actively searching for food 49 Actively searching Foraging behaviour
Aerial pursuit 36 Aerial pursuit Foraging behaviour
Deep plunging 45 Deep plunging Foraging behaviour
Dipping 42 Dipping Foraging behaviour
Feeding 33 Feeding, method unspecified Foraging behaviour
Holding fish 30 Holding fish Foraging behaviour
Pattering 39 Pattering Foraging behaviour
Scavenging at fishing vessel 41 Scavenging at fishing vessel Foraging behaviour
Shallow plunging 46 Shallow plunging Foraging behaviour
Colony rafts 67 Colony rafts General behaviour
Courtship display 61 Coursthip display General behaviour
Flushed 123 Flushed General behaviour
Head out of water 125 Head out of water General behaviour
Kleptoparasitising 68 Kleptoparasitising General behaviour
On artificial piece of something 122 On artificial piece of something General behaviour
Preening 66 Preening or bathing General behaviour
Resting 60 Resting or apparently asleep General behaviour
Dead 99 Dead Misfortune, disease
Escape diving 93 Escape diving Misfortune, disease
Injured 95 Injured Misfortune, disease
Oiled 97 Oiled Misfortune, disease
Sick 98 Sick, unwell Misfortune, disease
Under attack (as prey) by bird 91 Under attack (as prey) by bird Misfortune, disease
Under attack by kleptoparasite 90 Under attack by kleptoparasite Misfortune, disease