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jni
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ray
Automatic segmentation of electron microscopy volumes
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Rework README example to use some of the test data included with the ray repo
#53
DocSavage
opened
12 years ago
0
Ani selective agglo
#52
anirbanchakraborty
closed
12 years ago
0
Add InclusivenessFeatureManager
#51
anirbanchakraborty
closed
12 years ago
0
Save FeatureManager objects along with classifiers
#50
jni
opened
12 years ago
0
Provide checks for command-line option consistency
#49
jni
opened
12 years ago
0
Graph input is a label field, not a watershed
#48
jni
opened
12 years ago
0
imio.read_image_stack fails when it is not provided with an extension
#47
jni
closed
12 years ago
0
Watershed fails when values include inf
#46
jni
opened
12 years ago
0
Support multiple learning modes
#45
jni
closed
12 years ago
0
seeded watershed unconscionably slow when number of levels is large
#44
jni
closed
12 years ago
2
Expected rand computation is not symmetrical between cases
#43
jni
closed
13 years ago
0
add push-button interface to run entire pipeline
#42
jni
closed
12 years ago
0
copy operation is not atomic
#41
jni
opened
13 years ago
0
run RandomForest.fit() without feature importance when specified
#40
jni
closed
13 years ago
1
Uniquify data points found by learn_agglomerate
#39
jni
closed
13 years ago
1
add distutils support
#38
jni
opened
13 years ago
0
Add decision trees as a weak learner for adaboost
#37
kenryd
closed
13 years ago
1
edit feature manager test cases to include moment difference features
#36
jni
closed
12 years ago
0
fix agglo.Rag.refine_post_merge_boundaries() for volumes with no boundary pixels
#35
jni
closed
13 years ago
1
Enable progressbar for agglo.Rag.learn_agglomerate()
#34
jni
opened
13 years ago
0
Add progress bar to RandomForest
#33
kenryd
opened
13 years ago
1
Add support for watershed where shallow minima are removed
#32
kenryd
closed
13 years ago
1
Add support for oriented watershed transform
#31
kenryd
closed
13 years ago
2
ucm is incorrectly updated during agglomerate_ladder
#30
jni
closed
12 years ago
0
Add one-shot agglomeration procedure.
#29
jni
closed
13 years ago
1
allow different cache lengths for nodes and for boundaries
#28
jni
closed
13 years ago
0
Add stochastic merging and consensus merge paths
#27
jni
opened
13 years ago
0
add trainable normalized cut
#26
jni
opened
13 years ago
0
Show errors given a body number and matching volume
#25
jni
opened
13 years ago
1
add hyperbolic contour lines showing errors of same contribution in VOI breakdown plots
#24
jni
closed
13 years ago
1
Run unique() on training data after compiling
#23
jni
closed
13 years ago
1
ask Viren for LASH runtime + data
#22
jni
closed
13 years ago
2
figure out difference between ∆VOI and assignment to learn labels.
#21
jni
closed
13 years ago
1
paper outline
#20
jni
closed
13 years ago
1
test performance of node split
#19
jni
opened
13 years ago
0
test ray performance on natural images
#18
jni
closed
13 years ago
1
need to add regression testing to critical ray.py components
#17
jni
closed
13 years ago
1
Reorganize files
#16
jni
closed
13 years ago
2
add squiggliness feature
#15
jni
closed
13 years ago
2
add feature manager selection to the command-line interface
#14
jni
closed
12 years ago
0
specify boundary width
#13
jni
opened
13 years ago
0
Replace try: except: clauses with dict.setdefault() method
#12
jni
closed
13 years ago
2
networkx.Graph is too heavyweight for our segmentation
#11
jni
opened
13 years ago
1
refine_post_merge_boundaries may be vectorizable
#10
jni
opened
13 years ago
0
change verbosity using logging module
#9
jni
opened
13 years ago
0
Support backtracking in agglomeration with a tree structure for the history
#8
jni
opened
13 years ago
1
feature manager update breaks mean, sem and n features
#7
jni
closed
13 years ago
2
add boundary surface area feature
#6
jni
closed
13 years ago
1
add support for multidimensional probability volume
#5
jni
closed
13 years ago
2
add composite feature manager
#4
jni
closed
13 years ago
1
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