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jodyphelan / malaria-profiler

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Error write_text raise Not Implemented #14

Open suhanyaPrasad opened 3 months ago

suhanyaPrasad commented 3 months ago

Hi, I am getting errors in the writing output stage. Please see attached error file.
Traceback (most recent call last): File "/home/anaconda3/envs/mp/bin/malaria-profiler", line 487, in args.func(args) File "/home/anaconda3/envs/mp/bin/malaria-profiler", line 172, in main_profile mp.write_outputs(args,result) File "/home/anaconda3/envs/mp/lib/python3.10/site-packages/malaria_profiler/output.py", line 29, in write_outputs write_text(result,args.conf,text_output) File "/home/anaconda3/envs/mp/lib/python3.10/site-packages/malaria_profiler/output.py", line 136, in write_text raise NotImplemented

How do I proceed with the commands ? malaria-profile-error.txt

jodyphelan commented 2 months ago

I've just put in a fix in v0.0.6. If you run pip install --force-reinstall git+https://github.com/jodyphelan/malaria-profiler.git@dev to install the latest version, it should work after that.