phyloseq is a set of classes, wrappers, and tools (in R) to make it easier to import, store, and analyze phylogenetic sequencing data; and to reproducibly share that data and analysis with others. See the phyloseq front page:
I wanted to ask what the difference between vegan::capscale and ordinate::(method="CAP") is, as I got different centroids for factors constraints CAP values when using the same input.
Hi,
I wanted to ask what the difference between vegan::capscale and ordinate::(method="CAP") is, as I got different centroids for factors constraints CAP values when using the same input.
Thank you, Carmen