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joey711 / phyloseq

phyloseq is a set of classes, wrappers, and tools (in R) to make it easier to import, store, and analyze phylogenetic sequencing data; and to reproducibly share that data and analysis with others. See the phyloseq front page:
http://joey711.github.io/phyloseq/
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ps_filter not an available function #1684

Open KaraS106 opened 1 year ago

KaraS106 commented 1 year ago

Hello! I am trying to subset my phyloseq object (ps) but sample.data, however the ps_filter function is coming up as not available. Any advice? Or workarounds? Thanks!

david-barnett commented 1 year ago

hi, ps_filter is provided under the microViz package and not phyloseq itself, so you'd need to install and load microViz too https://david-barnett.github.io/microViz/

KaraS106 commented 1 year ago

Thank you!